BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004A06LP1|AL425214
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig194 1574 0.0
>3x_Contig194
Length = 985
Score = 1574 bits (792), Expect = 0.0
Identities = 835/852 (98%)
Strand = Plus / Minus
Query: 77 ttttactatgagaagatcagttgaaaggcatgttgaatgtacgcaatgaagagccacatc 136
||||| ||||||||||| |||||||||| |||||||||||| | ||||||||| | ||
Sbjct: 852 ttttaatatgagaagataagttgaaaggaatgttgaatgtaagaaatgaagagaaaaata 793
Query: 137 aatttttccaaccttgaatatataccatgatgtcaatgttatatacggtgagtgtggtga 196
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 aatttttacaaacttgaatatataccatgatgtcaatgttatatacggtgagtgtggtga 733
Query: 197 tattcctgatattaattgaatataaattatataatatawdgacaattcaaagtcttcggt 256
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 732 tattcctgatattaattgaatataaattatataatataaagacaattcaaagtcttcggt 673
Query: 257 gtaacactgataaatgaattgtcaagaagagaaatacaaaatgatggtaaacgaagtcgc 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtaacactgataaatgaattgtcaagaagagaaatacaaaatgatggtaaacgaagtcgc 613
Query: 317 aaatacaacgaataaataagtagtattttacctcggtagatacagtgcaagtttgtggaa 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aaatacaacgaataaataagtagtattttacctcggtagatacagtgcaagtttgtggaa 553
Query: 377 cttttgaaaagtataaactccgctgactatgcagatgctgaggctgagtcacgatgagct 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cttttgaaaagtataaactccgctgactatgcagatgctgaggctgagtcacgatgagct 493
Query: 437 ggtattgttagttcgccctttttgatcaagttattaacagcagaaaggatggctttggca 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ggtattgttagttcgccctttttgatcaagttattaacagcagaaaggatggctttggca 433
Query: 497 gaagcctctccaacatcttcagacataccaataccccattggtaggccttttcgttgtca 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gaagcctctccaacatcttcagacataccaataccccattggtaggccttttcgttgtca 373
Query: 557 atttctcttctgtdagccatatgcacgttagaagcagcctttgttgaagaaccagatcct 616
||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 372 atttctcttctgtaagcaatatgcacgtaagaagcagcctttgttgaagaaccagatcct 313
Query: 617 aaggaatgttcggtgtagttggcaacaccaagtttaacaccgagcaaatttgacaacgca 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaggaatgttcggtgtagttggcaacaccaagtttaacaccgagcaaatttgacaacgca 253
Query: 677 tcgattagagaggaaattggaccgtttccgagaccttcaatgccgacgacttcgttgtcg 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcgattagagaggaaattggaccgtttccgagaccttcaatgccgacgacttcgttgtcg 193
Query: 737 atctggacttgaccaacaaaactcttctgatcaccctgtactttagaaacattgtattct 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atctggacttgaccaacaaaactcttctgatcaccctgtactttagaaacattgtattct 133
Query: 797 aacaaagaaatgttggaggcgcttccatcgaggttgtataacgacttgaaggtgctgaca 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aacaaagaaatgttggaggcgcttccatcgaggttgtataacgacttgaaggtgctgaca 73
Query: 857 atttcgtttgcctttagttccttacctagagcmtcagccttttcttgcacttgagtggaa 916
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 72 atttcgtttgcctttagttccttacctagagcatcagccttttcttgcacttgagtggaa 13
Query: 917 aattcaatttgc 928
||||||||||||
Sbjct: 12 aattcaatttgc 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,633
Number of Sequences: 1807
Number of extensions: 12633
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)